Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887926.1_cds_XP_016442430.1_37698
CDS Infomation

[gene=LOC107767845] [db_xref=GeneID:107767845] [protein=probable polyamine oxidase 5] [protein_id=XP_016442430.1] [location=167582..169201] [gbkey=CDS]
Sequence

ATGGCGACCAAGAAACCAAAAGTTGTGATAATAGGGGCAGGAATGGCAGGTATTACAGCA
GCTAACAAGCTGTACACAGCTGCAGGCTCTAAACAATTGTTAGAGCTGTGCGTTGTGGAG
GGTGGTAATAGGATTGGTGGAAGGATTAAGACCTCAGAGTTTGGTGGCAGCAGGATTGAG
ATGGGTGCTACTTGGATCCATGGAATTGGGGGTAGCCCTGTTTACAAGATTGCTCAGGAT
ATTAACTCACTGGAATCACAGCAGCCTTGGGAGTGTATGGATGAGTTCTTGGATGAGCCA
TTGACTATTGCTGAAGGAGGACATGACCTCAATTCTTCCATTGTTGAGCCCATATCCAAT
CTTTTCAAGAAGCTCATGGATTTTGCTCAGGGGAAGGCTATTGACGATGGGGTGTGCAGT
GAATTTGCTCAAAGTTACAGATCCTCCAATGACAATCTCAGTATTGGTTCTTTCCTAAGG
AAAGGGCTTGATGCTTATTGGGGTTCAATGAAGGACCAAGAGGGAATTGATAACTGGAGC
AGAAAATCACTGGAGGATGGCATTTTTGCAATGCTTGAGAACACACAAAGGACTTACACG
TCAGCTGGTGATTTGCACACTCTAGATTTCAATGCAGAAAGCGAATATCGTATGTTTCCT
GGGAAGGAGATAACCATTGCCAAAGGCTACTCTACTATAGTTGAATCTTTGGCATCTGTT
CTGCCAGCTGGTTTGATTCAATTAGGCCGAAAGGTCACCAGAATTGAATGGCAGCCTGAT
GATGGTGGTTACCACCAACCATTAGATGTCGAAAATGGCGATGATACTAAGCCAGTAACG
CTACATTTTTATGATGGGTCAATCATGTATGCTGATCATGTCATTGTCACAGTCTCACTT
GGGGTTCTAAAACGAGAGATTCGCGATGATTCTGGTATGTTTAGTCCTCCGCTTCCTAGT
TTTAAGACACAGGCAATCTCAAGGCTTGGTTTTGGTGTTGTTAACAAGCTATTCTTGCAA
TTAAGTCCAACCAAAGATGAAGATGGCTATGATGCCATGAAGTTCCCATACTTGCAGATG
GTCTTCCATCAGTCAGACTCAAAACTAAGGCATCCAAAAATCCCCTGGTGGATGAGGAGA
ACAGCTTCTTTATGTCCAATCTATGGCAGCTCAAATGTTCTATTATCATGGTTTGCAGGC
GCAGAAGCTCTTGAACTCGAATCTCTTGGTAATGAAGAGATAGTTGATGGGTTTTCGACA
ATGATCTCCGATTTCCTAGTAAACTCAAAGCATCTCAACAAGTTGTACAATGGGCATGCA
GAAAGTTGTTTCATTTTTGATAAGGTTTTAAAGAGCCAATGGGGTACTGATCCACTCTTC
TTGGGGTCATATAGTTATGTAGCAGTTGGATCAAGTGGAGATGATTTGGATACTATGGCT
GAGCCATTGCCAAAAAGGACCAATTATAGTTGTAATTCAAAGGGTTCCCCTCCACTTCAA
ATTCTATTTGCAGGGGAAGCAACACATAGAACCCATTATTCAACAACTCATGGTGCTTAT
TTTAGTGGCCTAAGAGAAGCCAATAGGCTCCTTCAGCACTATCACTGTATTGATATATGA

Peptide Sequence

PEP ID

XP_016442430.1
PEP Infomation

PREDICTED: probable polyamine oxidase 5 [Nicotiana tabacum]
Sequence

MATKKPKVVIIGAGMAGITAANKLYTAAGSKQLLELCVVEGGNRIGGRIKTSEFGGSRIE
MGATWIHGIGGSPVYKIAQDINSLESQQPWECMDEFLDEPLTIAEGGHDLNSSIVEPISN
LFKKLMDFAQGKAIDDGVCSEFAQSYRSSNDNLSIGSFLRKGLDAYWGSMKDQEGIDNWS
RKSLEDGIFAMLENTQRTYTSAGDLHTLDFNAESEYRMFPGKEITIAKGYSTIVESLASV
LPAGLIQLGRKVTRIEWQPDDGGYHQPLDVENGDDTKPVTLHFYDGSIMYADHVIVTVSL
GVLKREIRDDSGMFSPPLPSFKTQAISRLGFGVVNKLFLQLSPTKDEDGYDAMKFPYLQM
VFHQSDSKLRHPKIPWWMRRTASLCPIYGSSNVLLSWFAGAEALELESLGNEEIVDGFST
MISDFLVNSKHLNKLYNGHAESCFIFDKVLKSQWGTDPLFLGSYSYVAVGSSGDDLDTMA
EPLPKRTNYSCNSKGSPPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYHCIDI

Transcript Sequence

Gene sequence data has not been registered.